Sequence Alignment

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Objective: Perform one-on-one sequence alignment and present alignment data in multiple unique ways.

Sequence alignment is one of the most frequently used operations in DNA and protein sequence analysis. It usually gives detailed information about the sequence relationships between two DNAs or proteins. From the alignment results, it is possible to identify conserved regions which may imply their similarities in biological function. The Sequence Alignment function in GeneLooper™ 2.0 is sophisticated and informative.

Features:

1. Easy to load sequences: a pool of sequences may be loaded simultaneously.
2. Sophisticated aligning algorithm: searches the best alignment between two sequences with no need to adjust parameters.
3. Align proteins directly translated from the loaded DNA sequences for immediate testing of the consequence of a difference in DNA sequences.
4. Align the reverse complement strands derived from loaded DNA sequences.
5. Proportional and precisely-labeled alignment diagram: ideal for the comparison of two alternatively spliced variants.
6. Editable whole sequence alignment report.
7. Tabulated base-to-base comparison: ideal for SNP analysis.