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          GeneLooper™ 2.0: Single Sequence Utilities

Sequence Viewing and Editing

Objective: View, edit and analyze nucleotide and protein sequences.

Features:

1.Multiple ways to load sequences:

  • single sequence.
  • a folder of sequences.
  • a specific sequence from a Q-fasta file with an ID.
  • multiple sequences from a Q-fasta file.
  • 2. Standard document editing environment:
  • undo, cut, paste and case change.
  • sequence filter.
  • 3. Multiple ways to search ORF:
  • one by one.
  • longest complete ORF.
  • longest incomplete ORF.
  • detailed ORF map.
  • 4. On-screen information:
  • sequence size, selected length and location.
  • GC content or molecular weight.
  • 5. Translation and reverse complementing.
    6. Hydropath plot.
    7. Export sequences to other utilities of GeneLooper™ 2.0

     
    High-Throughput Utilities
    Single Sequence Utilities

  • Viewing and Editing
  • Restriction Analysis
  • Sequence Alignment
  • Local Similarity Search
  • Oligo Design
  • Oligo Database Search
  • Journal Formatting
  •  
    A sample of working interface:

    Seq viewing 1

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